In past decades, a multitude of event related to supply chain disruption (e.g., the earthquake in Japan 2011, global economic crises in 2011, and current Covid19 case) have occurred in succession, causing greats loses to enterprise or even the national scale. Seaport, under global economic and supply chain integration, is also vulnerable on this event and sometime generating a domino effect to the entire supply chain network. The vulnerability of seaport thus needs to be addressed to ensure the functionality of seaport and enhance supply chain resilience. The primary goal of this study is to develop a framework that can be useful to understand: the phenomena of interdependency of the conditional risk in the seaports; and risk appetite from their entities too. This study investigated Indonesian seaport operation related the supply chain disruption. In realization, this research started with observing the extensive literature review and risk document related supply chain disruption from the Indonesian seaport. Furthermore, this research finds that there are 10 dimensional threats factors and 61 seaport risk factors that have clear implication to disrupt supply chain continuity – not only Indonesia but also somewhere seaport.